Class jalview.bin.CommandLineOperations

28

tests

0

failures

0

ignored

42.476s

duration

100%

successful

Tests

Test Duration Result
reportCurrentWorkingDirectory 0s passed
testAllInputOperations[0](CMD [-color zappo] executed successfully!, Failed command : -color zappo) 0s passed
testAllInputOperations[10](CMD [-noquestionnaire] executed successfully!, Failed command : -noquestionnaire) 0s passed
testAllInputOperations[1](CMD [-props test/jalview/bin/testProps.jvprops] executed successfully!, Failed command : -props File) 0s passed
testAllInputOperations[2](CMD [-sortbytree] executed successfully!, Failed command : -sortbytree) 0s passed
testAllInputOperations[3](CMD [-jabaws http://www.compbio.dundee.ac.uk/jabaws] executed successfully!, Failed command : -jabaws http://www.compbio.dundee.ac.uk/jabaws) 0s passed
testAllInputOperations[4](CMD [-open examples/uniref50.fa] executed successfully!, Failed command : -open examples/uniref50.fa) 0s passed
testAllInputOperations[5](CMD [-nosortbytree] executed successfully!, Failed command : -nosortbytree) 0s passed
testAllInputOperations[6](CMD [-features examples/testdata/plantfdx.features] executed successfully!, Failed command : -features examples/testdata/plantfdx.features) 0s passed
testAllInputOperations[7](CMD [-annotations examples/testdata/plantfdx.annotations] executed successfully!, Failed command : -annotations examples/testdata/plantfdx.annotations) 0s passed
testAllInputOperations[8](CMD [-tree examples/testdata/uniref50_test_tree] executed successfully!, Failed command : -tree examples/testdata/uniref50_test_tree) 0s passed
testAllInputOperations[9](CMD [-nousagestats] executed successfully!, Failed command : -nousagestats) 0s passed
testHeadlessModeOutputOperations[0](nodisplay -open examples/uniref50.fa, -eps, test/jalview/bin/test_uniref50_out.eps, true, 4096, 13000) 2.559s passed
testHeadlessModeOutputOperations[10](headless -open examples/uniref50.fa, -msf, test/jalview/bin/test_uniref50_out.msf, true, 2096, 13000) 2.653s passed
testHeadlessModeOutputOperations[11](headless -open examples/uniref50.fa, -pileup, test/jalview/bin/test_uniref50_out.aln, true, 2096, 13000) 2.678s passed
testHeadlessModeOutputOperations[12](headless -open examples/uniref50.fa, -pir, test/jalview/bin/test_uniref50_out.pir, true, 2096, 13000) 2.581s passed
testHeadlessModeOutputOperations[13](headless -open examples/uniref50.fa, -pfam, test/jalview/bin/test_uniref50_out.pfam, true, 2096, 13000) 2.662s passed
testHeadlessModeOutputOperations[14](headless -open examples/uniref50.fa, -blc, test/jalview/bin/test_uniref50_out.blc, true, 2096, 13000) 2.637s passed
testHeadlessModeOutputOperations[15](headless -open examples/uniref50.fa, -jalview, test/jalview/bin/test_uniref50_out.jvp, true, 2096, 13000) 2.912s passed
testHeadlessModeOutputOperations[1](nodisplay -open examples/uniref50.fa, -eps, test/jalview/bin/test_uniref50_out.eps, false, 4096, 13000) 2.804s passed
testHeadlessModeOutputOperations[2](nogui -open examples/uniref50.fa, -eps, test/jalview/bin/test_uniref50_out.eps, true, 4096, 13000) 2.546s passed
testHeadlessModeOutputOperations[3](nogui -open examples/uniref50.fa, -eps, test/jalview/bin/test_uniref50_out.eps, false, 4096, 13000) 2.825s passed
testHeadlessModeOutputOperations[4](headless -open examples/uniref50.fa, -eps, test/jalview/bin/test_uniref50_out.eps, true, 4096, 13000) 2.521s passed
testHeadlessModeOutputOperations[5](headless -open examples/uniref50.fa, -svg, test/jalview/bin/test_uniref50_out.svg, false, 4096, 13000) 2.837s passed
testHeadlessModeOutputOperations[6](headless -open examples/uniref50.fa, -png, test/jalview/bin/test_uniref50_out.png, true, 4096, 13000) 2.548s passed
testHeadlessModeOutputOperations[7](headless -open examples/uniref50.fa, -html, test/jalview/bin/test_uniref50_out.html, true, 4096, 13000) 2.582s passed
testHeadlessModeOutputOperations[8](headless -open examples/uniref50.fa, -fasta, test/jalview/bin/test_uniref50_out.mfa, true, 2096, 13000) 2.578s passed
testHeadlessModeOutputOperations[9](headless -open examples/uniref50.fa, -clustal, test/jalview/bin/test_uniref50_out.aln, true, 2096, 13000) 2.553s passed

Standard output

Test CWD is /home/thomas/Studium/Master_2/java-hiwi/jalview